RNA-Seq Profiling Shows Divergent Gene Expression Patterns in Arabidopsis Grown under Different Densities.
Identifieur interne : 000325 ( Main/Exploration ); précédent : 000324; suivant : 000326RNA-Seq Profiling Shows Divergent Gene Expression Patterns in Arabidopsis Grown under Different Densities.
Auteurs : Di Guo [République populaire de Chine] ; Xiaoming Song [République populaire de Chine] ; Min Yuan [République populaire de Chine] ; Zhenyi Wang [République populaire de Chine] ; Weina Ge [République populaire de Chine] ; Li Wang [République populaire de Chine] ; Jinpeng Wang [République populaire de Chine] ; Xiyin Wang [République populaire de Chine]Source :
- Frontiers in plant science [ 1664-462X ] ; 2017.
Abstract
Plants growing under high-density (HD) conditions experience increased competition for water, nutrients, and light, possibly leading to changes in size, biomass, morphology, and productivity. However, no research has focused on the relationship between whole-genome expression patterns and growth density. Here, we performed whole-genome RNA sequencing to examine the gene expression patterns in Arabidopsis grown under low and high densities. Of the 20,660 detected genes, the expression levels of 98 were enhanced and 107 were repressed under HD growth. Further analysis revealed that changes in density influenced metabolism- and stimulus-related genes the most. Furthermore, HD growth led to a shade avoidance phenotype, represented by upward growth and a reduction in rosette leaves. Moreover, a cluster of glutaredoxin genes, GRXS3, 4, 5, 7, and 8, were significantly down-regulated under high density, suggesting that high density affects plant growth mainly by nitrate limitation.
DOI: 10.3389/fpls.2017.02001
PubMed: 29234331
PubMed Central: PMC5712407
Affiliations:
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and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Sciences, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation></author><author><name sortKey="Ge, Weina" sort="Ge, Weina" uniqKey="Ge W" first="Weina" last="Ge">Weina Ge</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Sciences, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Li" sort="Wang, Li" uniqKey="Wang L" first="Li" last="Wang">Li Wang</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Sciences, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Jinpeng" sort="Wang, Jinpeng" uniqKey="Wang J" first="Jinpeng" last="Wang">Jinpeng Wang</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Sciences, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Xiyin" sort="Wang, Xiyin" uniqKey="Wang X" first="Xiyin" last="Wang">Xiyin Wang</name><affiliation wicri:level="1"><nlm:affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Life Sciences, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan</wicri:regionArea><wicri:noRegion>Tangshan</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Plants growing under high-density (HD) conditions experience increased competition for water, nutrients, and light, possibly leading to changes in size, biomass, morphology, and productivity. However, no research has focused on the relationship between whole-genome expression patterns and growth density. Here, we performed whole-genome RNA sequencing to examine the gene expression patterns in <i>Arabidopsis</i> grown under low and high densities. Of the 20,660 detected genes, the expression levels of 98 were enhanced and 107 were repressed under HD growth. Further analysis revealed that changes in density influenced metabolism- and stimulus-related genes the most. Furthermore, HD growth led to a shade avoidance phenotype, represented by upward growth and a reduction in rosette leaves. Moreover, a cluster of glutaredoxin genes, <i>GRXS3, 4, 5, 7</i>, and <i>8</i>, were significantly down-regulated under high density, suggesting that high density affects plant growth mainly by nitrate limitation.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">29234331</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>01</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>8</Volume><PubDate><Year>2017</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>RNA-Seq Profiling Shows Divergent Gene Expression Patterns in <i>Arabidopsis</i> Grown under Different Densities.</ArticleTitle><Pagination><MedlinePgn>2001</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fpls.2017.02001</ELocationID><Abstract><AbstractText>Plants growing under high-density (HD) conditions experience increased competition for water, nutrients, and light, possibly leading to changes in size, biomass, morphology, and productivity. However, no research has focused on the relationship between whole-genome expression patterns and growth density. Here, we performed whole-genome RNA sequencing to examine the gene expression patterns in <i>Arabidopsis</i> grown under low and high densities. Of the 20,660 detected genes, the expression levels of 98 were enhanced and 107 were repressed under HD growth. Further analysis revealed that changes in density influenced metabolism- and stimulus-related genes the most. Furthermore, HD growth led to a shade avoidance phenotype, represented by upward growth and a reduction in rosette leaves. Moreover, a cluster of glutaredoxin genes, <i>GRXS3, 4, 5, 7</i>, and <i>8</i>, were significantly down-regulated under high density, suggesting that high density affects plant growth mainly by nitrate limitation.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Guo</LastName><ForeName>Di</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Song</LastName><ForeName>Xiaoming</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yuan</LastName><ForeName>Min</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Zhenyi</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ge</LastName><ForeName>Weina</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Li</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Jinpeng</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Xiyin</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>School of Life Sciences, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Center for Genomics and Computational Biology, North China University of Science and Technology, Tangshan, China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>11</Month><Day>28</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Arabidopsis</Keyword><Keyword MajorTopicYN="N">RNA-Seq</Keyword><Keyword MajorTopicYN="N">glutaredoxin</Keyword><Keyword MajorTopicYN="N">growth density</Keyword><Keyword MajorTopicYN="N">shade avoidance</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>06</Month><Day>20</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>11</Month><Day>09</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>12</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>12</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>12</Month><Day>14</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">29234331</ArticleId><ArticleId IdType="doi">10.3389/fpls.2017.02001</ArticleId><ArticleId IdType="pmc">PMC5712407</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>PLoS One. 2016 Apr 29;11(4):e0154084</Citation><ArticleIdList><ArticleId IdType="pubmed">27129101</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2016 Feb;170(2):989-99</Citation><ArticleIdList><ArticleId IdType="pubmed">26662603</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2005 Aug 12;309(5737):1052-6</Citation><ArticleIdList><ArticleId IdType="pubmed">16099979</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell Mol Life Sci. 2011 Jun;68(12):2013-37</Citation><ArticleIdList><ArticleId IdType="pubmed">21611891</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2016 Apr 08;7:365</Citation><ArticleIdList><ArticleId IdType="pubmed">27092146</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2013 Mar;25(3):834-50</Citation><ArticleIdList><ArticleId IdType="pubmed">23524661</ArticleId></ArticleIdList></Reference><Reference><Citation>Genes Dev. 2005 Dec 1;19(23):2811-5</Citation><ArticleIdList><ArticleId IdType="pubmed">16322556</ArticleId></ArticleIdList></Reference><Reference><Citation>Chem Biodivers. 2011 Apr;8(4):699-709</Citation><ArticleIdList><ArticleId IdType="pubmed">21480516</ArticleId></ArticleIdList></Reference><Reference><Citation>Biol Chem. 2015 May;396(5):495-509</Citation><ArticleIdList><ArticleId IdType="pubmed">25781542</ArticleId></ArticleIdList></Reference><Reference><Citation>Guang Pu Xue Yu Guang Pu Fen Xi. 2004 Feb;24(2):204-6</Citation><ArticleIdList><ArticleId IdType="pubmed">15769018</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1998 Jan 16;279(5349):407-9</Citation><ArticleIdList><ArticleId IdType="pubmed">9430595</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2010 Mar;61(6):1001-13</Citation><ArticleIdList><ArticleId IdType="pubmed">20409274</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2016 Sep 21;7:1391</Citation><ArticleIdList><ArticleId IdType="pubmed">27708653</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Plant Sci. 2002 Sep;7(9):399-404</Citation><ArticleIdList><ArticleId IdType="pubmed">12234731</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2016 Feb 04;11(2):e0148582</Citation><ArticleIdList><ArticleId IdType="pubmed">26845330</ArticleId></ArticleIdList></Reference><Reference><Citation>J Sci Food Agric. 2017 Jan;97(2):427-433</Citation><ArticleIdList><ArticleId IdType="pubmed">27392118</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2005 Mar;56(413):935-43</Citation><ArticleIdList><ArticleId IdType="pubmed">15710638</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2016 May 12;11(5):e0155351</Citation><ArticleIdList><ArticleId IdType="pubmed">27171343</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2016 Feb 29;7:236</Citation><ArticleIdList><ArticleId IdType="pubmed">26973679</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2015 Dec 21;5:18835</Citation><ArticleIdList><ArticleId IdType="pubmed">26686007</ArticleId></ArticleIdList></Reference><Reference><Citation>Biotechnol Adv. 2012 Sep-Oct;30(5):1047-58</Citation><ArticleIdList><ArticleId IdType="pubmed">21888962</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2016 Apr 14;16:86</Citation><ArticleIdList><ArticleId IdType="pubmed">27079791</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2004 May;135(1):201-11</Citation><ArticleIdList><ArticleId IdType="pubmed">15122022</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2005 Aug 12;309(5737):1056-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16099980</ArticleId></ArticleIdList></Reference><Reference><Citation>Ann Bot. 2010 Jul;106(1):173-81</Citation><ArticleIdList><ArticleId IdType="pubmed">20495200</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2013 Sep;163(1):331-53</Citation><ArticleIdList><ArticleId IdType="pubmed">23893169</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Signal Behav. 2016;11(4):e1171450</Citation><ArticleIdList><ArticleId IdType="pubmed">27049601</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Environ. 2007 Nov;30(11):1465-79</Citation><ArticleIdList><ArticleId IdType="pubmed">17897416</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2016 Jun 28;7:944</Citation><ArticleIdList><ArticleId IdType="pubmed">27446171</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Guo, Di" sort="Guo, Di" uniqKey="Guo D" first="Di" last="Guo">Di Guo</name></noRegion><name sortKey="Ge, Weina" sort="Ge, Weina" uniqKey="Ge W" first="Weina" last="Ge">Weina Ge</name><name sortKey="Ge, Weina" sort="Ge, Weina" uniqKey="Ge W" first="Weina" last="Ge">Weina Ge</name><name sortKey="Guo, Di" sort="Guo, Di" uniqKey="Guo D" first="Di" last="Guo">Di Guo</name><name sortKey="Song, Xiaoming" sort="Song, Xiaoming" uniqKey="Song X" first="Xiaoming" last="Song">Xiaoming Song</name><name sortKey="Song, Xiaoming" sort="Song, Xiaoming" uniqKey="Song X" first="Xiaoming" last="Song">Xiaoming Song</name><name sortKey="Wang, Jinpeng" sort="Wang, Jinpeng" uniqKey="Wang J" first="Jinpeng" last="Wang">Jinpeng Wang</name><name sortKey="Wang, Jinpeng" sort="Wang, Jinpeng" uniqKey="Wang J" first="Jinpeng" last="Wang">Jinpeng Wang</name><name sortKey="Wang, Li" sort="Wang, Li" uniqKey="Wang L" first="Li" last="Wang">Li Wang</name><name sortKey="Wang, Li" sort="Wang, Li" uniqKey="Wang L" first="Li" last="Wang">Li Wang</name><name sortKey="Wang, Xiyin" sort="Wang, Xiyin" uniqKey="Wang X" first="Xiyin" last="Wang">Xiyin Wang</name><name sortKey="Wang, Xiyin" sort="Wang, Xiyin" uniqKey="Wang X" first="Xiyin" last="Wang">Xiyin Wang</name><name sortKey="Wang, Zhenyi" sort="Wang, Zhenyi" uniqKey="Wang Z" first="Zhenyi" last="Wang">Zhenyi Wang</name><name sortKey="Wang, Zhenyi" sort="Wang, Zhenyi" uniqKey="Wang Z" first="Zhenyi" last="Wang">Zhenyi Wang</name><name sortKey="Yuan, Min" sort="Yuan, Min" uniqKey="Yuan M" first="Min" last="Yuan">Min Yuan</name><name 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